SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42811

Signal sequence   MRPALFLCPVLISVLFLLSSLSLISG

Length  26

Organism  Danio rerio (Zebrafish) (Brachydanio rerio)

UniProt ID  Q9DGH0,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42811.cif

Structure  SPKB42811.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2790.50164

Aliphatic index  176.1538462

Isoelectric point  8.549912035

Charge (pH=7)   0.936006272

Topological polar surface area  936.29

Aromaticity  0.076923077

Average rotatable bonds  3.384615385

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  35

X logP energy  -3.65193

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.