SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42681

Signal sequence   MDRRFTVFLVIALVTSIYEVLS

Length  22

Organism  Heterodera glycines (Soybean cyst nematode worm)

UniProt ID  Q9BN19,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42681.cif

Structure  SPKB42681.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2573.08894

Aliphatic index  145.9090909

Isoelectric point  6.488833372

Charge (pH=7)   -0.000651131

Topological polar surface area  973.97

Aromaticity  0.136363636

Average rotatable bonds  3.772727273

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  33

X logP energy  -4.74746

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.