SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42623

Signal sequence   MIRRTLILCAVAALSG

Length  16

Organism  Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) (Mesorhizobium loti (strain MAFF 303099))

UniProt ID  Q98HD3,

Motif  1..16



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42623.cif

Structure  SPKB42623.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1688.12284

Aliphatic index  158.75

Isoelectric point  10.52640717

Charge (pH=7)   1.936002961

Topological polar surface area  664.08

Aromaticity  0

Average rotatable bonds  3.5

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  23

X logP energy  -5.16956

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.