SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42617

Signal sequence   MNFSKSGLVAVSLAALVASG

Length  20

Organism  Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) (Mesorhizobium loti (strain MAFF 303099))

UniProt ID  Q98EC1,

Motif  1..20



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42617.cif

Structure  SPKB42617.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1922.27014

Aliphatic index  122

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  766.25

Aromaticity  0.05

Average rotatable bonds  3.15

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  28

X logP energy  -8.9724

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.