SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42574

Signal sequence   MDSRVSILFVCAIAVSCFTSGSA

Length  23

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q93YX4,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42574.cif

Structure  SPKB42574.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2364.77514

Aliphatic index  101.7391304

Isoelectric point  6.064584924

Charge (pH=7)   -0.12552196

Topological polar surface area  924.1

Aromaticity  0.086956522

Average rotatable bonds  3.260869565

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  35

X logP energy  -10.96033

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.