SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42341

Signal sequence   MAYSKACYKLTTITILLLSFTLPSLA

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q8W246,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42341.cif

Structure  SPKB42341.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2863.50674

Aliphatic index  131.5384615

Isoelectric point  9.274958252

Charge (pH=7)   1.933718687

Topological polar surface area  1016.14

Aromaticity  0.115384615

Average rotatable bonds  3.5

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  40

X logP energy  -5.9667

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.