SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42330

Signal sequence   MSWKVPMLVGLVVLGTHIWTINK

Length  23

Organism  Rattus norvegicus (Rat)

UniProt ID  Q8VIH8,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42330.cif

Structure  SPKB42330.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2623.25624

Aliphatic index  135.2173913

Isoelectric point  10.80542203

Charge (pH=7)   2.088303323

Topological polar surface area  910.81

Aromaticity  0.086956522

Average rotatable bonds  3.608695652

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  33

X logP energy  -2.5053

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.