SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42325

Signal sequence   MEDIMTSLLVATSRVVVTISLAYVPVKSAFA

Length  31

Organism  Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))

UniProt ID  Q8UK62,

Motif  1..31



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42325.cif

Structure  SPKB42325.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3312.97134

Aliphatic index  131.9354839

Isoelectric point  6.487519403

Charge (pH=7)   -0.000942853

Topological polar surface area  1251.89

Aromaticity  0.064516129

Average rotatable bonds  3.419354839

Number of hydrogen bond donors  45

Number of hydrogen bond acceptors  46

X logP energy  -9.76483

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.