SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42322

Signal sequence   MTLKKLSYRLAAASALSFFVTSNAFA

Length  26

Organism  Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))

UniProt ID  Q8UB32,

Motif  1..26



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42322.cif

Structure  SPKB42322.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2809.31914

Aliphatic index  94.23076923

Isoelectric point  10.90180955

Charge (pH=7)   2.996540506

Topological polar surface area  1089.46

Aromaticity  0.153846154

Average rotatable bonds  3.5

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  39

X logP energy  -9.96493

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.