SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42320

Signal sequence   MKIFSPIRLVLAIAALMSVFSAPAFA

Length  26

Organism  Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))

UniProt ID  Q8U9L4,

Motif  1..26



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42320.cif

Structure  SPKB42320.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2765.45424

Aliphatic index  135.3846154

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  921.85

Aromaticity  0.115384615

Average rotatable bonds  3.307692308

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  34

X logP energy  -3.15783

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.