SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42301

Signal sequence   MKNSFRFSFTVITTFIICVLVSGA

Length  24

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q8S8H9,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42301.cif

Structure  SPKB42301.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2682.23444

Aliphatic index  105.4166667

Isoelectric point  9.833242293

Charge (pH=7)   1.935711238

Topological polar surface area  985.01

Aromaticity  0.166666667

Average rotatable bonds  3.583333333

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  36

X logP energy  -7.60693

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.