SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42297

Signal sequence   MCCFLLVSVLLATTLTDVASA

Length  21

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q8RZ40,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42297.cif

Structure  SPKB42297.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2171.65354

Aliphatic index  148.5714286

Isoelectric point  3.749955547

Charge (pH=7)   -1.125518648

Topological polar surface area  783.77

Aromaticity  0.047619048

Average rotatable bonds  3.238095238

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  31

X logP energy  -6.1904

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.