SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42274

Signal sequence   MSKTVRTLALGGLVLAGLSA

Length  20

Organism  Xanthomonas axonopodis pv. citri (strain 306)

UniProt ID  Q8PNU2,

Motif  1..20



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42274.cif

Structure  SPKB42274.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1958.39034

Aliphatic index  141.5

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  785.06

Aromaticity  0

Average rotatable bonds  3.3

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  28

X logP energy  -8.00253

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.