SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42190

Signal sequence   MTSFAVVARLITRAPRVRA

Length  19

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q8LFD5,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42190.cif

Structure  SPKB42190.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2115.57134

Aliphatic index  107.8947368

Isoelectric point  12.97714556

Charge (pH=7)   3.997971054

Topological polar surface area  886.62

Aromaticity  0.052631579

Average rotatable bonds  3.526315789

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  28

X logP energy  -8.42652

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.