SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42170

Signal sequence   MQPCVLWWLALGLLLGIPAGA

Length  21

Organism  Rattus norvegicus (Rat)

UniProt ID  Q8K560,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42170.cif

Structure  SPKB42170.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2222.77764

Aliphatic index  158.0952381

Isoelectric point  5.922539791

Charge (pH=7)   -0.063990417

Topological polar surface area  702.41

Aromaticity  0.095238095

Average rotatable bonds  3.095238095

Number of hydrogen bond donors  24

Number of hydrogen bond acceptors  25

X logP energy  0.4357

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.