SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42051

Signal sequence   MDICSRNEKLAIRRPAILVALALLLCS

Length  27

Organism  Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

UniProt ID  Q8CW29,

Motif  1..27



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42051.cif

Structure  SPKB42051.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2983.68544

Aliphatic index  155.5555556

Isoelectric point  8.827928922

Charge (pH=7)   1.875951507

Topological polar surface area  1181

Aromaticity  0

Average rotatable bonds  3.740740741

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  40

X logP energy  -8.60919

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.