SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42038

Signal sequence   MKYYGKCISYISILILTFFIGG

Length  22

Organism  Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)

UniProt ID  Q8CTZ0,

Motif  1..22



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42038.cif

Structure  SPKB42038.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2531.10904

Aliphatic index  124.0909091

Isoelectric point  9.18829164

Charge (pH=7)   1.932868273

Topological polar surface area  847.84

Aromaticity  0.227272727

Average rotatable bonds  3.727272727

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  33

X logP energy  -1.5674

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.