SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42030

Signal sequence   MARTVATFFLMLVSLACLDA

Length  20

Organism  Sigmodon hispidus (Hispid cotton rat)

UniProt ID  Q8CIQ3,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42030.cif

Structure  SPKB42030.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2173.67494

Aliphatic index  127

Isoelectric point  6.161167719

Charge (pH=7)   -0.063547244

Topological polar surface area  776.11

Aromaticity  0.1

Average rotatable bonds  3.45

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  29

X logP energy  -4.40123

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.