SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41984

Signal sequence   MKNLILILPLLMLTG

Length  15

Organism  Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)

UniProt ID  Q89F32,

Motif  1..15



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41984.cif

Structure  SPKB41984.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1683.22724

Aliphatic index  208

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  551.27

Aromaticity  0

Average rotatable bonds  3.8

Number of hydrogen bond donors  18

Number of hydrogen bond acceptors  21

X logP energy  0.5833

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.