SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41982

Signal sequence   MNDARSITRRRFMTLTGSGLAMLGGGHAFA

Length  30

Organism  Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)

UniProt ID  Q89ED5,

Motif  1..30



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41982.cif

Structure  SPKB41982.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3196.71374

Aliphatic index  65.33333333

Isoelectric point  12.50005509

Charge (pH=7)   3.089326629

Topological polar surface area  1365.04

Aromaticity  0.066666667

Average rotatable bonds  3.566666667

Number of hydrogen bond donors  51

Number of hydrogen bond acceptors  46

X logP energy  -16.88082

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.