SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41972

Signal sequence   MSSLMLRLLPLLYIISA

Length  17

Organism  Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus)

UniProt ID  Q89738,

Motif  1..17



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41972.cif

Structure  SPKB41972.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1934.46924

Aliphatic index  189.4117647

Isoelectric point  9.348807885

Charge (pH=7)   0.997130574

Topological polar surface area  662.95

Aromaticity  0.058823529

Average rotatable bonds  3.705882353

Number of hydrogen bond donors  24

Number of hydrogen bond acceptors  25

X logP energy  -1.25533

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.