SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41962

Signal sequence   MRAIRMLLVSALTLGSVTAYA

Length  21

Organism  Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)

UniProt ID  Q88FS9,

Motif  1..21



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41962.cif

Structure  SPKB41962.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2237.74734

Aliphatic index  139.5238095

Isoelectric point  11.14762293

Charge (pH=7)   1.997127263

Topological polar surface area  870.27

Aromaticity  0.047619048

Average rotatable bonds  3.476190476

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  31

X logP energy  -6.92496

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.