SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41959

Signal sequence   MASVALVGLMSAGQLWA

Length  17

Organism  Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)

UniProt ID  Q88D03,

Motif  1..17



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41959.cif

Structure  SPKB41959.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1705.06314

Aliphatic index  126.4705882

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  628.26

Aromaticity  0.058823529

Average rotatable bonds  3.176470588

Number of hydrogen bond donors  22

Number of hydrogen bond acceptors  23

X logP energy  -4.5719

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.