SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41958

Signal sequence   MFLRHVIVFSFIALLAG

Length  17

Organism  Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)

UniProt ID  Q888C4,

Motif  1..17



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41958.cif

Structure  SPKB41958.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1934.41614

Aliphatic index  160.5882353

Isoelectric point  10.5517587

Charge (pH=7)   1.088890079

Topological polar surface area  639.73

Aromaticity  0.176470588

Average rotatable bonds  3.588235294

Number of hydrogen bond donors  23

Number of hydrogen bond acceptors  22

X logP energy  0.07137

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.