SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41957

Signal sequence   MTSNNTAHRSATKRLFKTCALAAGLGLMSLPAFA

Length  34

Organism  Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)

UniProt ID  Q887Q8,

Motif  1..34



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41957.cif

Structure  SPKB41957.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3552.18844

Aliphatic index  77.94117647

Isoelectric point  11.65160089

Charge (pH=7)   4.026321984

Topological polar surface area  1447.14

Aromaticity  0.058823529

Average rotatable bonds  3.411764706

Number of hydrogen bond donors  53

Number of hydrogen bond acceptors  52

X logP energy  -17.54186

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.