SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41954

Signal sequence   MKLNPLMAAGMGLGFTLFWACPTLA

Length  25

Organism  Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)

UniProt ID  Q887Q2,

Motif  1..25



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41954.cif

Structure  SPKB41954.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2655.28764

Aliphatic index  94

Isoelectric point  8.545189979

Charge (pH=7)   0.93571455

Topological polar surface area  869.5

Aromaticity  0.12

Average rotatable bonds  3.24

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  34

X logP energy  -3.5853

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.