SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41953

Signal sequence   MNSPLRRLSTPTLLSLAVALGLSG

Length  24

Organism  Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)

UniProt ID  Q887Q1,

Motif  1..24



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41953.cif

Structure  SPKB41953.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2467.95284

Aliphatic index  134.1666667

Isoelectric point  12.50010931

Charge (pH=7)   1.997977677

Topological polar surface area  1003.31

Aromaticity  0

Average rotatable bonds  3.291666667

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  35

X logP energy  -11.27176

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.