SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41949

Signal sequence   MNINYFVRIVPVAVVLLVGISGASMA

Length  26

Organism  Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)

UniProt ID  Q87ZU3,

Motif  1..26



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41949.cif

Structure  SPKB41949.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2734.35404

Aliphatic index  153.4615385

Isoelectric point  9.348807885

Charge (pH=7)   0.997130574

Topological polar surface area  990.8

Aromaticity  0.076923077

Average rotatable bonds  3.307692308

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  35

X logP energy  -5.79063

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.