SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41948

Signal sequence   MRLIRMLLATALTFSVIPAHA

Length  21

Organism  Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)

UniProt ID  Q87ZS6,

Motif  1..21



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41948.cif

Structure  SPKB41948.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2325.90244

Aliphatic index  144.2857143

Isoelectric point  12.50011018

Charge (pH=7)   2.088886768

Topological polar surface area  849.7

Aromaticity  0.047619048

Average rotatable bonds  3.523809524

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  30

X logP energy  -4.39216

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.