SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41947

Signal sequence   MINLFRGLLVVLCFASAMVAA

Length  21

Organism  Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)

UniProt ID  Q87Y40,

Motif  1..21



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41947.cif

Structure  SPKB41947.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2239.82384

Aliphatic index  153.3333333

Isoelectric point  8.549912035

Charge (pH=7)   0.936006272

Topological polar surface area  770.54

Aromaticity  0.095238095

Average rotatable bonds  3.428571429

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  28

X logP energy  -2.94383

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.