SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41946

Signal sequence   MIVSPCDAPKTPVKRLRSALLASSALVCLFSAGQLWA

Length  37

Organism  Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)

UniProt ID  Q87UY0,

Motif  1..37



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41946.cif

Structure  SPKB41946.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3901.70224

Aliphatic index  113.5135135

Isoelectric point  9.757391703

Charge (pH=7)   2.873884661

Topological polar surface area  1477.95

Aromaticity  0.054054054

Average rotatable bonds  3.324324324

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  53

X logP energy  -13.14236

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.