SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41883

Signal sequence   MTRCAVVAAVAAVLLVAGAAA

Length  21

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q84M47,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41883.cif

Structure  SPKB41883.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1928.38214

Aliphatic index  149.047619

Isoelectric point  8.549912035

Charge (pH=7)   0.936006272

Topological polar surface area  727.45

Aromaticity  0

Average rotatable bonds  2.80952381

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  26

X logP energy  -6.39603

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.