SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41760

Signal sequence   MSVCPAPRSPVRWLHAFTLCLLLAVLAG

Length  28

Organism  Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)

UniProt ID  Q7W183,

Motif  1..28



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41760.cif

Structure  SPKB41760.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3022.72424

Aliphatic index  128.9285714

Isoelectric point  8.837902826

Charge (pH=7)   1.964937336

Topological polar surface area  1051.61

Aromaticity  0.071428571

Average rotatable bonds  3.178571429

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  38

X logP energy  -5.60076

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.