SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41528

Signal sequence   MQNRNTFSWVKEQMTRSIFVSMMIYIITRASISNA

Length  35

Organism  Amborella trichopoda

UniProt ID  Q70XZ0,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Plastid

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41528.cif

Structure  SPKB41528.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4155.87904

Aliphatic index  78

Isoelectric point  11.43078747

Charge (pH=7)   2.99860404

Topological polar surface area  1715.05

Aromaticity  0.114285714

Average rotatable bonds  4

Number of hydrogen bond donors  62

Number of hydrogen bond acceptors  59

X logP energy  -17.32139

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.