SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41513

Signal sequence   MCSWSLSSHTLTSPVRQAAMEPKSSSCGGAGIRLRLLVVLHLLLLVPSSAMA

Length  52

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q6YXT7,

Motif  1..52



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41513.cif

Structure  SPKB41513.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5464.52464

Aliphatic index  114.4230769

Isoelectric point  9.911059533

Charge (pH=7)   3.057323204

Topological polar surface area  2129.07

Aromaticity  0.019230769

Average rotatable bonds  3.403846154

Number of hydrogen bond donors  79

Number of hydrogen bond acceptors  78

X logP energy  -22.72529

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.