SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41479

Signal sequence   MAPRGSGRLEAVVFAVMVLFCSG

Length  23

Organism  Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1) (Pacheco's disease virus)

UniProt ID  Q6UDI7,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41479.cif

Structure  SPKB41479.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2397.89734

Aliphatic index  97.39130435

Isoelectric point  8.549845238

Charge (pH=7)   0.937778084

Topological polar surface area  896.29

Aromaticity  0.086956522

Average rotatable bonds  3.304347826

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  32

X logP energy  -7.46246

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.