SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41478

Signal sequence   MGHSGENVLCVALLAIYLAAGGAA

Length  24

Organism  Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1) (Pacheco's disease virus)

UniProt ID  Q6UDF8,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41478.cif

Structure  SPKB41478.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2301.70384

Aliphatic index  130.4166667

Isoelectric point  5.361016533

Charge (pH=7)   -0.972156617

Topological polar surface area  882.15

Aromaticity  0.041666667

Average rotatable bonds  3.041666667

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  32

X logP energy  -7.9343

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.