SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41465

Signal sequence   MNKFSNTRIGFTCAVMAPRTLILTVGLLCMRIRSL

Length  35

Organism  Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5)

UniProt ID  Q6SW92,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41465.cif

Structure  SPKB41465.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3928.85084

Aliphatic index  111.4285714

Isoelectric point  12.05346802

Charge (pH=7)   4.873726588

Topological polar surface area  1525.11

Aromaticity  0.057142857

Average rotatable bonds  3.742857143

Number of hydrogen bond donors  58

Number of hydrogen bond acceptors  54

X logP energy  -13.58392

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.