SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41429

Signal sequence   MGSLKLSTFAIVVCLSILLISPIEVNG

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q6NMS3,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41429.cif

Structure  SPKB41429.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2818.46624

Aliphatic index  165.9259259

Isoelectric point  6.231833229

Charge (pH=7)   -0.062510328

Topological polar surface area  1018.69

Aromaticity  0.037037037

Average rotatable bonds  3.444444444

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  38

X logP energy  -6.6803

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.