SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41409

Signal sequence   MNSMLNFTHKRKSVSRLLAPVALAVILAG

Length  29

Organism  Photobacterium profundum (strain SS9)

UniProt ID  Q6LME4,

Motif  1..29



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41409.cif

Structure  SPKB41409.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3138.82664

Aliphatic index  124.4827586

Isoelectric point  12.53174777

Charge (pH=7)   4.0882967

Topological polar surface area  1240.95

Aromaticity  0.034482759

Average rotatable bonds  3.620689655

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  43

X logP energy  -10.95776

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.