SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41289

Signal sequence   MDLMMALKRVCRVLLFVTQMYVFSGRGSLS

Length  30

Organism  Xenopus laevis (African clawed frog)

UniProt ID  Q6DE06,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41289.cif

Structure  SPKB41289.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3453.25924

Aliphatic index  107

Isoelectric point  10.44865794

Charge (pH=7)   2.935300686

Topological polar surface area  1300.48

Aromaticity  0.1

Average rotatable bonds  3.9

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  47

X logP energy  -9.01269

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.