SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41127

Signal sequence   MARSLAALLLLLVAAAGDSHA

Length  21

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q60E34,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41127.cif

Structure  SPKB41127.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2064.47394

Aliphatic index  158.5714286

Isoelectric point  7.550936504

Charge (pH=7)   0.089336563

Topological polar surface area  813.66

Aromaticity  0

Average rotatable bonds  3.19047619

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  28

X logP energy  -6.76093

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.