SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41111

Signal sequence   MEHGGHELAVVVLVLLLLVSATSC

Length  24

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q5Z678,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41111.cif

Structure  SPKB41111.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2491.00214

Aliphatic index  166.25

Isoelectric point  5.332922605

Charge (pH=7)   -1.878621989

Topological polar surface area  925.27

Aromaticity  0

Average rotatable bonds  3.375

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  34

X logP energy  -5.8826

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.