SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41109

Signal sequence   MTMRAARLSGSTGLTAALVAVLLVLTG

Length  27

Organism  Nocardia farcinica (strain IFM 10152)

UniProt ID  Q5YQT1,

Motif  1..27



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41109.cif

Structure  SPKB41109.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2674.25614

Aliphatic index  137.4074074

Isoelectric point  12.50010931

Charge (pH=7)   1.997977677

Topological polar surface area  1065.1

Aromaticity  0

Average rotatable bonds  3.259259259

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  38

X logP energy  -11.21806

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.