SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41063

Signal sequence   MKLSNMTAFLSLLIFILLVAIEA

Length  23

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q5VN46,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41063.cif

Structure  SPKB41063.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2552.21214

Aliphatic index  178.2608696

Isoelectric point  6.408795646

Charge (pH=7)   -0.000535612

Topological polar surface area  870.62

Aromaticity  0.086956522

Average rotatable bonds  3.739130435

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  32

X logP energy  -1.5793

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.