SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41058

Signal sequence   MTDHKIIMLLLLGIYCIQA

Length  19

Organism  Acanthamoeba polyphaga mimivirus (APMV)

UniProt ID  Q5UR02,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41058.cif

Structure  SPKB41058.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2189.76074

Aliphatic index  169.4736842

Isoelectric point  7.355480856

Charge (pH=7)   0.02621971

Topological polar surface area  762.67

Aromaticity  0.052631579

Average rotatable bonds  3.894736842

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  29

X logP energy  -1.2551

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.