SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB41057

Signal sequence   MYVFLLFSRYKIFYVYIKKMAHRSRC

Length  26

Organism  Acanthamoeba polyphaga mimivirus (APMV)

UniProt ID  Q5UQZ1,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB41057.cif

Structure  SPKB41057.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3364.13694

Aliphatic index  86.15384615

Isoelectric point  10.53699248

Charge (pH=7)   6.022621982

Topological polar surface area  1204.64

Aromaticity  0.269230769

Average rotatable bonds  4.230769231

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  43

X logP energy  -2.88089

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.