SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40994

Signal sequence   MARIIITLTIPLFYFFFFSLLSHQTMS

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q5Q0E2,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40994.cif

Structure  SPKB40994.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3238.93934

Aliphatic index  119.2592593

Isoelectric point  9.351184298

Charge (pH=7)   1.088039665

Topological polar surface area  1086.41

Aromaticity  0.222222222

Average rotatable bonds  3.740740741

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  40

X logP energy  -2.82013

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.