SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40958

Signal sequence   MARARASAMGAAPPPHLRSHDLVVVVAVAAAALCLACRGASA

Length  42

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q5N8F2,

Motif  1..42



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40958.cif

Structure  SPKB40958.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4110.89114

Aliphatic index  105

Isoelectric point  10.45618263

Charge (pH=7)   3.056286288

Topological polar surface area  1633

Aromaticity  0

Average rotatable bonds  3

Number of hydrogen bond donors  60

Number of hydrogen bond acceptors  57

X logP energy  -18.39842

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.