SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40951

Signal sequence   MDVNRRIGVKDALLALLLALLQG

Length  23

Organism  Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)

UniProt ID  Q5MK86,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40951.cif

Structure  SPKB40951.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2493.04924

Aliphatic index  173.9130435

Isoelectric point  9.690158308

Charge (pH=7)   0.998575611

Topological polar surface area  1014.12

Aromaticity  0

Average rotatable bonds  3.782608696

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  32

X logP energy  -6.43386

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.